- BS/BA: Chemical Engineering
- MS: Chemical Engineering
- PhD: Chemical Engineering
- Phone: 82883947
- Fax: 82884931
- Email: motamedian@modares.ac.ir
- Resume Download
Name: Ehsan Motamedian Assistant professor of chemical engineering Biotechnology department, Faculty of chemical engineering, Tarbiat Modares university P.O.Box: 14115-143 Tehran, Iran Tel: (+98)21-82883947 E-mail: motamedian@modares.ac.ir Fax: (+98)21-82884931 Website: sbme.modares.ac.ir Education B.Sc. Ferdowsi University of Mashhad 2000-2004 M.Sc. Iran University of Science and Technology 2004-2006 Ph.D. Iran University of Science and Technology 2006-2011 Dissertation title: Investigation on growth and product formation by Bacillus subtilis using a metabolic model Positions and Employment Postdoctoral Research Fellow, Pasteur Institute of Iran, 2011-2012 Assistant Professor, Tarbiat Modares University, 2012-present Courses Taught Systems metabolic engineering Biochemistry Molecular genetics Research Interest Reconstruction of metabolic networks Systems metabolic engineering of microbial cell factories Omics data integration Biomedical applications of metabolic modeling Multi-scale modeling and microbial communities Publications Journal Papers Motamedian, E., Mohammadi, M., Shojaosadati, S. A., Heydari, M. (2017) TRFBA: an algorithm to integrate genome-scale metabolic and transcriptional regulatory networks with incorporation of expression data, Bioinformatics. btw772. Jamialahmadi, O., Motamedian, E. and Hashemi-Najafabadi, S. (2016) BiKEGG: a COBRA toolbox extension for bridging the BiGG and KEGG databases, Molecular BioSystems, 12, 3459-3466. Motamedian, E., Saeidi, M. and Shojaosadati, S. (2016) Reconstruction of a charge balanced genome-scale metabolic model to study the energy-uncoupled growth of Zymomonas mobilis ZM1,Molecular BioSystems,12, 1241-1249. Motamedian, E., Ghavami, G. and Sardari, S. (2015) Investigation on metabolism of cisplatin resistant ovarian cancer using a genome scale metabolic model and microarray data, Iranian journal of basic medical sciences,18, 267. rani, Z.A., Maghsoudi, A., Shojaosadati, S.A. and Motamedian, E. (2015) Development and in silico analysis of a new nitrogen-limited feeding strategy for fed-batch cultures ofPichia pastoris based on a simple pH-control system,Biochemical Engineering Journal,98, 1-9. Motamedian, E. (2015) A new algorithm to find all alternate optimal flux distributions of a metabolic network, Computers & Chemical Engineering, 73, 64-69. Motamedian, E. and Naeimpoor, F. (2011) Prediction of proton exchange and bacterial growth on various substrates using constraint-based modeling approach, Biotechnology and Bioprocess Engineering,16, 875-884. Motamedian, E. and Naeimpoor, F. (2011) Flux distribution in Bacillus subtilis: inspection on plurality of optimal solutions, Iranian journal of biotechnology, 9, 260-266. Conference Papers Elham Taheri, Ehsan Motamedian, Fatemeh Bagheri (2015), A Bi-Level Integration Algorithm for Simultaneous Modeling of Multiple Cells, 4thConference on Constraint-Based Reconstruction and Analysis (COBRA 2015), Heidelberg, Germany. aryam Mohammadi, Ehsan Motamedian, Seyed Abbas Shojaosadati (2015), Integration of Metabolic and Regulatory Networks with Incorporating Gene Expression Data, 16th International Conference on Systems Biology (ICSB 2015), Singapore. Elham Taheri, Ehsan Motamedian, Fatemeh Bagheri (2015), Finding essential genes for proliferation of cancer cell by integration of transcription data into a human metabolic model, 16th International Conference on Systems Biology (ICSB 2015), Singapore. Mona Heydari, Ehsan Motamedian, Seyed Abbas Shojaosadati (2014), Integration of Microarray Data into a Genome-Scale Metabolic Model to Study Flux Distribution after Gene Knockout, International Science Index Vol: 8 No: 11 Part XVII, Istanbul, Turkey. Maryam Saeidi, Ehsan Motamedian, Seyed Abbas Shojaosadati (2014), Reconstruction of a Genome-Scale Metabolic Model to Simulate Uncoupled Growth of Zymomonas mobilis, International Science Index Vol: 8 No: 11 Part XVII, Istanbul, Turkey. Ehsan Motamedian (2014), Effect of Variable Fluxes on Optimal Flux Distribution in a Metabolic Network, International Science Index Vol: 8 No: 11 Part XVII, Istanbul, Turkey. Ehsan Motamedian, Fereshteh Naeimpoor (2010), Comparison of Bacillus subtilis Growth on Different Nitrogen Sources using Flux Balance Analysis. 13th Iranian National Chemical Engineering Congress & 1st International Regional Chemical and Petroleum Engineering, Kermanshah, Iran, October 25-28. |
